CDS

Accession Number TCMCG005C14952
gbkey CDS
Protein Id XP_020263532.1
Location complement(join(137216168..137216187,137217333..137217486,137217727..137217849,137217931..137218045,137218327..137218425,137218509..137218561,137224583..137224739,137224888..137224946,137225050..137225117,137225194..137225337,137225758..137225821,137227593..137227643,137227723..137227862,137227928..137228067,137230197..137230282,137230795..137230940,137231037..137231109,137243060..137243135,137248932..137249039,137249214..137249260,137249799..137249844,137252595..137252707,137252789..137252824,137252891..137253094,137255211..137255282))
Gene LOC109839493
GeneID 109839493
Organism Asparagus officinalis

Protein

Length 797aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020407943.1
Definition DNA mismatch repair protein MSH4 isoform X1

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08740        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGAGGACGCAGGCGGAGGAGACGATCGATCGAGCTACGTCTGTGGATTGATCGAGAACAGAGCGAAGGAGGTTGGTGTGGCCGCCTTTGACTTGCGGTCGGCTTCTCTGCATCTTTCACAATACATTGAAACAAGCTGTTCATATCAAAATACGAAGACCCTACTGCACTTCTATGATCCTATGGTAATAATTGTGCCCGCAATCAAGCTGGCACCAGACGGTATGGCTGGAGTCTCAGAGCTTGTAGATAAACATTACTCTTCAAACAAAAAGGTCATAATGTCTCGTGGCTGTTTCGATGATACCAAGGGAGCTGTTTTGATTAAAAATTTGGCAGCTAAGGAGCCATCTGCTCTTGGCTTAGATACTTATTACAAACAATATTATCTTTGCCTAGCTGCCGCTGCTGCAACAATCAAATGGACTGAAGCGGAGAAGGGTGTGATCATTACAAATCATTCTTTAGCGGTTACTTTTAATGGCTCATGTGATCACATGAATATAGACGCGACAAGTGTCCAGAATTTGGAAATTATTGACCCATTGTGTACTGAACTCTGGGGCAGTAACAACAAGAAGAGAAGTCTGTTCCAGATGCTGAAGACAACAAAGACTATTGGAGGGTCTAGACTACTTCGAGCGAACTTGTTGCAGCCTCTGAAAGACATTAAAACCATCAATGCTCGTCTAGATTGCTTAGATGAGTTGATGAACAATGAAGAGTTATTCTTTGGTCTATCCCAGGGTCTCCGTAAATTCCCTAAAGAGACTGATAAGGTTCTATGCCACTTCTGTTTTAAACCAAAAAAGATCACTGAAGAAATTTTGAAGCCTGCCAACGGAAGAAAGAGTCAATTGTTGATATCGAACATTATCATTCTGAAAACAGCTCTAGATGCCTTGCCTTTTCTTACAAAGGTGCTCAAGGATGCAAAGAGTTTTCTGCTTTGCAATATTTACAGATCTGTTTGTGAAAATGAAAAATATGCCTGCATGAGACAGAGAATTGGTGATGCGATCGATGAAGATGTTTTACATGCAAGGTCTCCCTTTGTTGCCTGCACACAACAATGTTTTGCCATCAAAGCTGGAATAGATGGGCTTCTTGATGTTGCCCGGCGTTCTTTCTGTGATACAAGTGAAGCTATCCATAACCTTGCAAACAAATACCGTGAGGAATTTAAGATGCCAAATTTGAAGATTCCTTATAATAATAGGCAAGGATTTTACTTTAGCATTCCCCAAAAGGACATAACTGGAAAACTTCCTGAAAAATTTATTCAGGTTGTGAAACATGGGAAGAACATGCACTGCTCAAGCGTTGAACTTGCTTCACTAAACATCAGGAATAAATCTGCAGCAGCTGAATGTTTTATGAGGACAGAGTTTTGCTTGGAAGGACTAATTGATGACATAAGGAAGGATATTTCCATTTTGACACTGCTCGCAGAGGTCTTGTGCCTTTTAGATATGCTAGTCAATTCCTTTGCAAACATGATATCTACTAAGCCTGTCGATCGCTATACAAGACCAGAATTCACAGTAAATGGTCCGATGGCAGTCGATGCTGGACGGCACCCGATTTTAGAAAGCTTGCACAATGATTTTATTCCTAACAATCTTTTCCTATCAGAAGCATCAAACATGGTGGTTGTCATGGGCCCAAACATGAGTGGCAAAAGCACTTATCTTCAACAAATTTGCTTAATCATTATCCTCGCACAAATTGGGTGTTATATTCCTGCGCGTTTTGCGTCACTAAGAGTTGTTGATCGCATATTCACTCGGATAGGGAGTGGAGACAATGTTGAATATAACTCTAGCACTTTTATGACTGAAATGAAAGAGACCGCTTTCTTGATGCAAAACATTTCTCCAAGGAGCCTTGTTGTCATGGATGAACTTGGAAGGGCTACTTCTACCTCTGATGGATATGCAATTGCTTGGAGCTGTTGTGAGCATTTACTTTCTCTCAAAGCGTATACTATATTTGCTACACACATGGAAGAGTTATCTGAATTGGCAACCATCTATCCTAATGTCAAGATTCTTCATTTTGAAGTTGATTTGAGGAACAATCGCTTAGACTTCAAGTTTTGCCTCAAGGATGGACCACGCCAAGTACCACACTATGGCCTCTTACTGGCTGGAGTTGCGGGTCTACCAAGTTCTGTGGTTGAAACAGCAAGAAGCATCACCACAAAGATCACGGATAAGGAAGTGGAGAGGATGGATATAAACTGCGAGCAGTACCATTCAATTCAAATGGCGTACAGAGTAGCTCAAAGACTTATTTGCTTAAAATACTCCCAGCAAGGTGAGGATGAGACCCGAAGAGCTTTGCAAAATCTTAAGGAGAGCTACACAGAAGGTGGGAGTTCGCGTGGTTAA
Protein:  
MEDAGGGDDRSSYVCGLIENRAKEVGVAAFDLRSASLHLSQYIETSCSYQNTKTLLHFYDPMVIIVPAIKLAPDGMAGVSELVDKHYSSNKKVIMSRGCFDDTKGAVLIKNLAAKEPSALGLDTYYKQYYLCLAAAAATIKWTEAEKGVIITNHSLAVTFNGSCDHMNIDATSVQNLEIIDPLCTELWGSNNKKRSLFQMLKTTKTIGGSRLLRANLLQPLKDIKTINARLDCLDELMNNEELFFGLSQGLRKFPKETDKVLCHFCFKPKKITEEILKPANGRKSQLLISNIIILKTALDALPFLTKVLKDAKSFLLCNIYRSVCENEKYACMRQRIGDAIDEDVLHARSPFVACTQQCFAIKAGIDGLLDVARRSFCDTSEAIHNLANKYREEFKMPNLKIPYNNRQGFYFSIPQKDITGKLPEKFIQVVKHGKNMHCSSVELASLNIRNKSAAAECFMRTEFCLEGLIDDIRKDISILTLLAEVLCLLDMLVNSFANMISTKPVDRYTRPEFTVNGPMAVDAGRHPILESLHNDFIPNNLFLSEASNMVVVMGPNMSGKSTYLQQICLIIILAQIGCYIPARFASLRVVDRIFTRIGSGDNVEYNSSTFMTEMKETAFLMQNISPRSLVVMDELGRATSTSDGYAIAWSCCEHLLSLKAYTIFATHMEELSELATIYPNVKILHFEVDLRNNRLDFKFCLKDGPRQVPHYGLLLAGVAGLPSSVVETARSITTKITDKEVERMDINCEQYHSIQMAYRVAQRLICLKYSQQGEDETRRALQNLKESYTEGGSSRG